1. CellNOptR::CNOlistDREAM
    Data used for the DREAM3 challenge
    json| rda| rds
    list
  2. CellNOptR::CNOlistToy
    Toy data
    json| rda| rds
    list
  3. CellNOptR::CNOlistToy2
    Toy data with 2 time points
    json| rda| rds
    list
  4. CellNOptR::CNOlistToyMMB
    Toy data
    rda| rds
    CNOlist
  5. CellNOptR::DreamModel
    Model used for the DREAM3 challenge
    json| rda| rds
    list
  6. CellNOptR::ToyModel
    Toy model
    json| rda| rds
    list
  7. CellNOptR::ToyModel2
    Toy model
    json| rda| rds
    list
  8. CellNOptR::cnodata
    Get data from a CellNOpt data repository
    rda| rds
    CNOlist
  9. CellNOptR::pknmodel
    pknmodel
    json| rda| rds
    list
  10. CNORfeeder::PPINigraph
    Protein-protein interaction netwrok
    rda| rds
    igraph
  11. CNORfeeder::UniprotIDdream
    Uniprot identifiers for proteins in DreamModel
    json| rda| rds
    list
  12. CNORfeeder::cnolist
    CNOlist
    rda| rds
    CNOlist
  13. CNORfeeder::cnolist
    CNOlist
    rda| rds
    CNOlist
  14. CNORfeeder::database
    OmniPath PPI
    csv| json| rda| rds
    matrix|12336 x
  15. CNORfeeder::feederObject
    Feeder Object
    json| rda| rds
    list
  16. CNORfeeder::indices
    Mis-fit indices
    json| rda| rds
    list
  17. CNORfeeder::integratedModel
    Integrated Model
    json| rda| rds
    list
  18. CNORfeeder::model
    Prior Knowledge Network
    json| rda| rds
    list
  19. CNORfeeder::model
    Prior Knowledge Network
    json| rda| rds
    list
  20. CNORfeeder::simData
    CNORode simuation data
    csv| json| rda| rds
    list
  21. CNORode::cnodata
    A cnodata from CellNoptR
    rda| rds
    CNOlist
  22. CNORode::cnolist
    A cnolist from CellNoptR
    rda| rds
    CNOlist
  23. CNORode::cnolistCNORodeExample
    A cnolist from CellNoptR
    json| rda| rds
    list
  24. CNORode::indices
    Indices that relate cnolist to model
    json| rda| rds
    list
  25. CNORode::model
    A model from CellNoptR
    json| rda| rds
    list
  26. CNORode::pknmodel
    A pknmodel from CellNoptR
    json| rda| rds
    list
  27. CNORode::pknmodel
    A pknmodel from CellNoptR
    json| rda| rds
    list
  28. cosmosR::HMDB_mapper_vec
    Toy Input Transcription Data Set
    json| rda| rds
    character
  29. cosmosR::meta_network
    Meta Prior Knowledge Network
    csv| xlsx| json| ndjson| rda| rds
    data.frame|100488 x 3
  30. cosmosR::toy_RNA
    Toy Input Transcription Data Set
    json| rda| rds
    numeric
  31. cosmosR::toy_metabolic_input
    Toy Metabolic Input Data
    json| rda| rds
    numeric
  32. cosmosR::toy_network
    Toy Input Network
    csv| xlsx| json| ndjson| rda| rds
    data.frame|101 x 3
  33. cosmosR::toy_signaling_input
    Toy Signaling Input
    json| rda| rds
    numeric